STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22561.1LigA protein. (1098 aa)    
Predicted Functional Partners:
EFL22444.1
Conserved hypothetical protein.
  
    0.854
guaA
GMP synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.
    
  0.748
EFL24452.1
LigA protein.
  
  
 0.737
EFL24533.1
Conserved hypothetical protein.
  
  
 0.737
EFL24451.1
N-6 DNA methylase superfamily protein.
 
    0.600
EFL22560.1
Hypothetical protein.
       0.569
EFL24005.1
Putative nucleoside-diphosphate-sugar epimerase.
  
    0.527
EFL26820.1
NAD-dependent epimerase/dehydratase.
  
    0.527
EFL27647.1
Conserved hypothetical protein.
  
    0.527
EFL21747.1
Small heat shock protein C2; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.525
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.