STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22567.1Putative copper amine oxidase. (437 aa)    
Predicted Functional Partners:
EFL24523.1
Glutamate decarboxylase and related PLP-dependent protein.
  
  
 0.909
EFL20452.1
Flavin-containing superfamily amine oxidase.
   
 
 0.904
EFL25473.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.894
EFL28257.1
Piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.894
EFL23961.1
Phenylacetaldehyde dehydrogenase.
   
 0.893
EFL27135.1
Aryl-alcohol dehydrogenase.
     
 0.888
EFL21147.1
Putative copper amine oxidase.
  
  
 
0.881
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.842
EFL22568.1
Conserved hypothetical protein.
       0.834
EFL24132.1
Putative oxidoreductase.
  
 
   0.817
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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