STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22580.1Conserved hypothetical protein. (167 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.785
EFL22578.1
methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.780
EFL24637.1
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.682
EFL22581.1
Putative ATPase, AFG1 family protein.
 
     0.675
EFL24904.1
Conserved hypothetical protein.
  
     0.662
EFL26390.1
Hydroperoxide resistance protein OsmC.
 
     0.650
EFL26136.1
Putative membrane protein.
  
     0.613
EFL22874.1
Putative ATP/GTP-binding protein.
  
     0.612
EFL23359.1
Putative tetratricopeptide repeat protein.
  
     0.610
EFL25342.1
Putative 2',5' RNA ligase family protein.
  
     0.582
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.