STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22581.1Putative ATPase, AFG1 family protein. (322 aa)    
Predicted Functional Partners:
EFL25350.1
Succinate dehydrogenase, cytochrome b556 subunit.
 
   
 0.837
EFL25349.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
 
     0.793
EFL25347.1
Succinate dehydrogenase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.786
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
  
    0.784
EFL22008.1
Conserved hypothetical protein.
  
     0.774
EFL22821.1
Putative tetratricopeptide repeat domain protein.
  
     0.774
EFL25348.1
Succinate dehydrogenase, flavoprotein subunit.
 
    0.767
EFL22580.1
Conserved hypothetical protein.
 
     0.675
EFL21141.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.605
EFL22578.1
methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.605
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.