STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22584.1Conserved hypothetical protein. (70 aa)    
Predicted Functional Partners:
EFL28265.1
Putative LigA.
    
  0.782
EFL27396.1
Putative FK-506 binding protein, peptidyl-prolyl cis-trans isomerase.
   
  0.729
EFL27397.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
   
  0.729
EFL22583.1
ABC-transporter ATP-binding protein.
 
     0.681
EFL28589.1
LigA protein.
 
     0.611
EFL22596.1
AP endonuclease, family 2.
       0.605
EFL22598.1
Putative integral membrane protein.
       0.605
EFL26651.1
Conserved hypothetical protein.
  
    0.584
EFL22981.1
Putative polysaccharide lyase family 8.
  
     0.581
EFL25475.1
Putative integral membrane protein.
  
     0.545
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.