Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22585.1Putative conjugal transfer protein. (117 aa)    
Predicted Functional Partners:
EFL25259.1
Putative regulatory protein.
  
     0.752
EFL20656.1
Putative sugar hydrolase.
  
     0.743
EFL22586.1
LysR family transcriptional regulator; Truncated CDS; Belongs to the LysR transcriptional regulatory family.
 
     0.710
EFL26717.1
Conserved hypothetical protein.
  
     0.674
EFL21769.1
Conserved hypothetical protein.
  
     0.652
EFL22185.1
Conserved hypothetical protein.
  
     0.651
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
  
     0.606
EFL27093.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
  
     0.566
EFL26296.1
Putative fibronectin type III domain protein.
  
     0.561
EFL23288.1
Conserved hypothetical protein.
  
     0.546
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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