STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22590.1Methyltransferase type 12. (200 aa)    
Predicted Functional Partners:
EFL22593.1
Integral membrane protein.
 
     0.779
EFL22592.1
Oxidoreductase, molybdopterin binding protein.
 
    0.772
EFL22588.1
Putative signal transduction histidine kinase.
 
     0.761
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
   
 0.686
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
   
 0.686
EFL23862.1
FAD dependent oxidoreductase.
   
 0.686
EFL27123.1
Subunit D/I family magnesium chelatase.
  
 0.685
EFL27124.1
Putative magnesium chelatase; Unextendable partial coding region.
  
 0.685
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
  
 
  0.653
EFL22589.1
DNA-binding response regulator ResD.
 
     0.622
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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