STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22592.1Oxidoreductase, molybdopterin binding protein. (419 aa)    
Predicted Functional Partners:
EFL22591.1
Conserved hypothetical protein.
 
     0.973
EFL22593.1
Integral membrane protein.
 
     0.944
EFL22590.1
Methyltransferase type 12.
 
    0.771
EFL22310.1
Putative secreted protein.
   
 0.746
EFL26791.1
Cytochrome c family protein.
   
 0.746
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
   
 
 0.743
EFL24557.1
Putative assimilatory nitrate reductase/sulfite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.711
EFL23349.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
   
 0.701
EFL23875.1
IPT/TIG domain/phospholipase D family protein.
   
 0.701
EFL27405.1
OmpA/MotB; Truncated CDS; unextendable partial coding region.
   
 0.701
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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