Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22594.1Putative secreted protein. (442 aa)    
Predicted Functional Partners:
EFL25351.1
Putative OHCU decarboxylase.
  
 
  0.628
EFL22593.1
Integral membrane protein.
       0.529
EFL25523.1
Putative ABC transporter integral membrane protein.
  
     0.440
EFL26557.1
Putative secreted protein; Overlaps another CDS with the same product name.
  
     0.440
EFL27353.1
Conserved hypothetical protein.
  
     0.425
EFL26077.1
Putative membrane protein.
  
     0.424
EFL28396.1
Putative ABC transporter integral membrane protein.
  
     0.421
EFL26397.1
Conserved hypothetical protein; Unextendable partial coding region.
 
 
  0.400
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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