STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22624.1Alpha-1,2-mannosidase. (1285 aa)    
Predicted Functional Partners:
EFL22622.1
Putative ABC-type sugar transport system, permease component.
     
 0.724
EFL22623.1
Putative solute-binding protein.
     
 0.724
EFL22621.1
Putative ABC-type sugar transport system, permease component.
     
 0.722
EFL27081.1
Putative alanine-rich protein.
  
     0.560
EFL20463.1
Probable alginate lyase.
  
     0.535
EFL28460.1
Putative secreted protein.
  
     0.529
EFL22089.1
Putative oxidoreductase (putative secreted protein).
  
     0.509
EFL24381.1
Putative alanine-rich protein.
  
     0.490
EFL22620.1
ROK family transcriptional regulator.
     
 0.440
EFL25685.1
beta-N-acetylhexosaminidase.
 
   
 0.429
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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