Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22630.1Conserved hypothetical protein. (285 aa)    
Predicted Functional Partners:
EFL22629.1
Hypothetical protein.
      
0.773
EFL25368.1
Conserved hypothetical protein.
  
     0.636
EFL21057.1
Conserved hypothetical protein.
  
     0.632
EFL22062.1
Putative nucleotide sugar-1-phosphate transferase.
  
   
 0.576
EFL22631.1
Putative reductase.
       0.568
EFL25211.1
Conserved hypothetical protein.
  
     0.476
EFL22166.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.465
EFL20856.1
Methyltransferase domain protein.
  
     0.455
EFL28446.1
PE-PGRS family protein.
  
     0.453
EFL26640.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.434
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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