STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22649.1Conserved domain protein. (64 aa)    
Predicted Functional Partners:
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
 
  
 0.793
EFL22648.1
Cytochrome P450 BJ-1 (Cytochrome P450 112).
  
    0.712
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.690
EFL28663.1
Transcriptional regulator, TetR family protein.
 
     0.507
EFL28123.1
Transcriptional regulator, TetR family protein.
 
     0.479
EFL21317.1
Cytochrome P450-SU2 (P450-CVB1) (CYP105B1).
  
    0.466
EFL28124.1
Cytochrome P450-SU2 (P450-CVB1) (CYP105B1).
  
    0.450
EFL21282.1
Transcriptional regulator, TetR family protein.
 
     0.441
EFL28127.1
Cytochrome P450-SU2 (P450-CVB1) (CYP105B1).
  
    0.418
EFL26534.1
Cytochrome P450-SU2 (P450-CVB1) (CYP105B1).
  
    0.417
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.