STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22696.1Putative ATP/GTP-binding protein. (198 aa)    
Predicted Functional Partners:
EFL22698.1
roadblock/LC7 domain protein.
 
   0.974
EFL22697.1
Conserved hypothetical protein.
 
     0.935
EFL22699.1
LigA protein.
 
     0.934
EFL26289.1
roadblock/LC7 domain protein.
 
   0.897
EFL25512.1
roadblock/LC7 domain protein.
 
   0.896
EFL23951.1
roadblock/LC7 domain protein.
 
   0.893
EFL27754.1
roadblock/LC7 domain protein.
 
   0.893
EFL29286.1
roadblock/LC7 domain protein.
 
   0.891
EFL21089.1
roadblock/LC7 domain protein.
 
   0.890
EFL28963.1
roadblock/LC7 domain protein.
 
   0.890
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.