Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22703.1Nucleic acid binding, OB-fold, tRNA/helicase-type. (152 aa)    
Predicted Functional Partners:
EFL22702.1
Putative membrane protein.
       0.882
EFL22705.1
Sensor histidine kinase KdpD.
     
 0.828
EFL22704.1
DNA-binding response regulator KdpE.
     
 0.826
EFL22701.1
Trk-type K+ transport system, NAD-binding component; Overlaps another CDS with the same product name.
  
    0.710
EFL22693.1
Putative amino acid permease.
  
     0.705
EFL22700.1
Trk-type K+ transport system, NAD-binding component; Overlaps another CDS with the same product name.
  
    0.641
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
   
  
 0.607
htpX-2
Protease HTPX; Belongs to the peptidase M48B family.
   
  
 0.607
EFL22753.1
RecQ family ATP-dependent DNA helicase; Truncated CDS.
  
  
 0.605
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
  
  
 0.598
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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