STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22714.1Putative membrane protein. (153 aa)    
Predicted Functional Partners:
EFL22711.1
Conserved hypothetical protein.
 
     0.836
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.814
EFL22713.1
Thioesterase.
       0.814
EFL22702.1
Putative membrane protein.
       0.605
EFL22703.1
Nucleic acid binding, OB-fold, tRNA/helicase-type.
       0.605
EFL22704.1
DNA-binding response regulator KdpE.
       0.605
EFL22705.1
Sensor histidine kinase KdpD.
       0.605
ftsQ
Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.570
EFL23417.1
Putative ATP-binding protein.
  
     0.528
EFL23397.1
Putative ATP-dependent DNA helicase.
  
     0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.