STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22716.1Conserved hypothetical protein. (100 aa)    
Predicted Functional Partners:
EFL22715.1
Conserved hypothetical protein.
       0.890
rbpA
Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.774
EFL21380.1
MerR family transcriptional regulator.
  
     0.773
EFL22711.1
Conserved hypothetical protein.
 
     0.772
EFL26774.1
Putative integral membrane protein.
  
     0.766
EFL26749.1
Integral membrane protein.
  
     0.765
whiA
Probable transcriptional regulatory protein whia; Involved in cell division and chromosome segregation.
  
     0.765
EFL22608.1
Conserved hypothetical protein.
  
     0.763
EFL26867.1
Putative integral membrane protein.
  
     0.763
EFL21826.1
ATPase involved in DNA repair.
  
     0.762
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.