STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22723.1Putative DNA-binding protein. (364 aa)    
Predicted Functional Partners:
EFL26749.1
Integral membrane protein.
  
   
 0.751
EFL22711.1
Conserved hypothetical protein.
 
     0.731
EFL23168.1
Putative cellulose-binding protein.
  
     0.727
rbpA
Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
   
 0.722
EFL22716.1
Conserved hypothetical protein.
 
     0.702
EFL26170.1
DNA polymerase III, delta subunit.
  
     0.692
EFL24877.1
Non-specific serine/threonine protein kinase.
    
  0.691
EFL25518.1
Septum formation initiator family protein.
  
     0.687
EFL22702.1
Putative membrane protein.
 
     0.673
EFL24341.1
Putative integral membrane protein.
  
  0.637
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.