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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22745.1Conserved hypothetical protein. (76 aa)    
Predicted Functional Partners:
EFL26444.1
Conserved hypothetical protein.
  
     0.711
EFL25702.1
Putative DNA or RNA helicase of superfamily II.
 
     0.671
EFL22608.1
Conserved hypothetical protein.
  
     0.635
EFL26849.1
Putative membrane protein.
  
     0.627
EFL24987.1
Putative transferase; Belongs to the methyltransferase superfamily.
  
     0.600
EFL26774.1
Putative integral membrane protein.
  
     0.552
EFL24306.1
Folate-binding protein YgfZ; Belongs to the GcvT family.
  
     0.528
EFL22861.1
Zinc metalloprotease.
  
     0.512
EFL22711.1
Conserved hypothetical protein.
  
     0.505
EFL22716.1
Conserved hypothetical protein.
  
     0.498
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.