STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22750.1ABC transporter, ATP-binding protein. (472 aa)    
Predicted Functional Partners:
EFL22751.1
MutT/nudix family DNA hydrolase; Belongs to the Nudix hydrolase family.
       0.766
EFL21564.1
Macrolide-specific ABC-type efflux carrier MacB.
  
  
  0.736
EFL22892.1
Putative ABC transporter, ATP binding protein.
  
  
  0.729
EFL23542.1
Lipoprotein releasing system, ATP-binding protein LolD.
  
  
  0.714
EFL26122.1
Putative ABC transporter, ATP-binding protein.
  
  
  0.708
EFL22752.1
Conserved hypothetical protein.
       0.691
EFL21119.1
Putative ABC transporter, ATP-binding protein.
  
  
  0.664
EFL22748.1
Sporulation transcription factor, WhiH.
       0.664
EFL29153.1
Putative ABC transporter, ATP-binding protein.
  
 
  0.655
EFL28420.1
ABC transporter, transmembrane region.
  
  
  0.639
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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