STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22755.1Conserved hypothetical protein. (218 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
 
 0.870
EFL25251.1
Conserved hypothetical protein.
  
     0.765
EFL21845.1
Conserved hypothetical protein.
  
     0.763
EFL21846.1
Conserved hypothetical protein.
  
     0.754
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
  
     0.748
EFL24349.1
Conserved hypothetical protein.
  
     0.746
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
   
 
 0.731
EFL27303.1
Putative DNA methyltransferase.
  
     0.704
EFL23603.1
Putative regulatory protein.
  
   0.679
EFL22610.1
Putative ribonuclease D.
    
 
 0.652
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.