STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22768.1Rhizobactin siderophore biosynthesis protein RhbC. (645 aa)    
Predicted Functional Partners:
EFL22767.1
Conserved hypothetical protein.
 
 
 0.921
EFL26944.1
Rhizobactin siderophore biosynthesis protein RhbE.
 
 
 0.890
EFL23786.1
Alcaligin biosynthesis enzyme.
 
 
 0.870
EFL23788.1
Putative siderophore synthetase component.
  
  0.829
hmtM
L-ornithine 5-monooxygenase.
 
 
 0.748
EFL23787.1
Putative acetyltransferase.
 
 
 0.723
EFL20500.1
L-ornithine 5-monooxygenase.
 
 
 0.714
EFL26943.1
Putative L-2,4-diaminobutyrate decarboxylase.
 
  
 0.552
EFL23785.1
L-2,4-diaminobutyrate decarboxylase (DABA decarboxylase)(DABA-DC).
 
  
 0.541
EFL21556.1
Putative acetyltransferase; Truncated CDS.
 
 
 0.494
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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