STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22781.1Putative two-component system sensor kinase. (470 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.980
EFL22782.1
DNA-binding response regulator RegX3.
 
  0.976
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.937
EFL20850.1
Two-component system response regulator.
 
  0.847
EFL23248.1
DNA-binding response regulator VicR.
  
  0.808
EFL21142.1
Two-component system response regulator TcsR4.
  
  0.805
EFL24289.1
DNA-binding response regulator.
  
  0.804
EFL22589.1
DNA-binding response regulator ResD.
  
  0.799
EFL20858.1
DNA-binding response regulator TcrA.
  
  0.798
EFL25455.1
DNA-binding response regulator MtrA.
  
  0.797
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.