STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22788.1Cysteine dioxygenase type I superfamily protein. (181 aa)    
Predicted Functional Partners:
EFL22789.1
Conserved hypothetical protein.
 
    0.927
EFL22787.1
Putative monooxygenase.
       0.755
EFL22781.1
Putative two-component system sensor kinase.
 
     0.693
EFL22782.1
DNA-binding response regulator RegX3.
       0.657
EFL22856.1
Putative phosphotransferase.
  
     0.541
EFL26465.1
Putative secreted protein.
  
     0.537
EFL22321.1
Catalase HPII.
    
  0.531
EFL25938.1
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.519
EFL21443.1
Conserved hypothetical protein; Unextendable partial coding region.
  
  
  0.482
EFL24027.1
Putative membrane protein.
  
     0.475
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.