STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22795.1Putative ATP dependent DNA helicase. (1076 aa)    
Predicted Functional Partners:
EFL22796.1
Putative ATP dependent DNA helicase.
     0.988
EFL22797.1
Putative ATP dependent DNA helicase.
     0.967
EFL22798.1
Endonuclease VIII.
 
  
 0.900
EFL22794.1
Conserved hypothetical protein.
       0.776
EFL22793.1
Conserved hypothetical protein.
       0.595
EFL26119.1
DNA-formamidopyrimidine glycosylase; Belongs to the FPG family.
  
  
 0.573
EFL24249.1
DNA repair protein RadA.
   
    0.557
EFL24250.1
DNA repair protein RadA.
   
    0.557
EFL25596.1
Conserved hypothetical protein.
  
  
 0.538
EFL20666.1
DNA-formamidopyrimidine glycosylase; Belongs to the FPG family.
  
  
 0.502
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.