STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22810.1Putative regulatory protein; Truncated CDS. (598 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
 
 0.998
EFL23001.1
Pas:ggdef.
 
 0.993
EFL27138.1
Sensor histidine kinase/response regulator.
 
 0.992
EFL25165.1
Putative GAF domain protein.
 
 0.979
EFL20670.1
Sensor histidine kinase/response regulator.
  
 0.968
EFL23884.1
Conserved hypothetical protein.
 
 0.963
EFL21328.1
Putative PAS fold protein.
 
 0.949
EFL24486.1
Conserved hypothetical protein.
 
 0.947
EFL27779.1
Putative PAS fold protein.
 
 0.944
EFL24487.1
Conserved hypothetical protein.
 
 0.941
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.