STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22811.1Conserved hypothetical protein. (225 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
 
 
 0.954
EFL28143.1
Modular polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.939
EFL28462.1
Putative non-ribosomal peptide synthetase; Truncated CDS; unextendable partial coding region.
  
 0.915
EFL23214.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.900
EFL20718.1
NAD-dependent epimerase/dehydratase.
 
 
 0.894
EFL23973.1
Lipopolysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.864
EFL23212.1
Hexapeptide transferase.
 
  
 0.858
EFL25894.1
Glycosyl transferase.
 
 
 0.842
EFL25118.1
Glycosyl transferase.
 
 
 0.838
EFL27759.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
 
 0.790
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.