STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22833.1FtsK/SpoIIIE family protein; Truncated CDS; unextendable partial coding region. (1104 aa)    
Predicted Functional Partners:
EFL29214.1
Secretion protein Snm4.
 
 
 0.981
EFL22832.1
Putative integral membrane protein.
 
 
 0.949
EFL22842.1
Conserved hypothetical protein.
 
 
 0.903
EFL29215.1
Conserved hypothetical protein.
 
 
 0.902
EFL24998.1
Secretion protein Snm4.
 
 
 0.767
EFL22843.1
Conserved hypothetical protein.
  
 
 
 0.723
EFL29211.1
Peptidase families S8 and S53 subfamily.
 
 
 0.703
EFL22836.1
Hypothetical protein; Belongs to the WXG100 family.
   
 
 0.673
EFL29217.1
Conserved hypothetical protein; Belongs to the WXG100 family.
   
 
 0.673
EFL22834.1
Hypothetical protein.
       0.661
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.