Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22840.1Conserved hypothetical protein. (159 aa)    
Predicted Functional Partners:
EFL22839.1
Conserved hypothetical protein.
       0.863
EFL22841.1
Serine protease (putative secreted protein); Belongs to the peptidase S8 family.
       0.736
EFL22844.1
Conserved hypothetical protein.
       0.684
EFL22843.1
Conserved hypothetical protein.
       0.682
EFL22838.1
Subtilisin BPN' (Subtilisin Novo) (SubtilisinDFE) (Alkaline protease).
       0.623
EFL25687.1
Hypothetical protein.
       0.572
EFL22842.1
Conserved hypothetical protein.
       0.503
EFL22837.1
Hypothetical protein; Belongs to the WXG100 family.
       0.419
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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