Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22841.1Serine protease (putative secreted protein); Belongs to the peptidase S8 family. (426 aa)    
Predicted Functional Partners:
EFL22842.1
Conserved hypothetical protein.
 
 0.884
EFL22843.1
Conserved hypothetical protein.
 
  
 0.818
EFL22844.1
Conserved hypothetical protein.
 
     0.798
EFL22839.1
Conserved hypothetical protein.
  
  0.791
EFL22845.1
Putative BldB protein.
     
 0.774
EFL22840.1
Conserved hypothetical protein.
       0.736
EFL21102.1
Leupeptin-inactivating enzyme 1 (LIE1).
  
 
 0.654
EFL27805.1
EndA/NucM family protease/nuclease; Unextendable partial coding region.
 
  
 0.638
EFL22833.1
FtsK/SpoIIIE family protein; Truncated CDS; unextendable partial coding region.
 
 
 0.564
EFL22837.1
Hypothetical protein; Belongs to the WXG100 family.
       0.553
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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