STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22844.1Conserved hypothetical protein. (264 aa)    
Predicted Functional Partners:
EFL22843.1
Conserved hypothetical protein.
 
     0.974
EFL22842.1
Conserved hypothetical protein.
 
     0.895
EFL22845.1
Putative BldB protein.
       0.845
EFL22841.1
Serine protease (putative secreted protein); Belongs to the peptidase S8 family.
 
     0.819
EFL22832.1
Putative integral membrane protein.
 
     0.778
EFL22840.1
Conserved hypothetical protein.
       0.711
EFL26468.1
Conserved hypothetical protein.
  
     0.693
EFL22839.1
Conserved hypothetical protein.
       0.678
EFL25267.1
Chorismate mutase.
  
     0.673
EFL24308.1
Putative AmfC protein.
  
     0.664
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.