STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22856.1Putative phosphotransferase. (187 aa)    
Predicted Functional Partners:
rimP
Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
     
 0.634
EFL22853.1
Conserved hypothetical protein.
       0.605
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
       0.605
EFL27260.1
SPFH/Band 7 domain protein; Truncated CDS; unextendable partial coding region.
       0.605
EFL22810.1
Putative regulatory protein; Truncated CDS.
  
     0.577
EFL22788.1
Cysteine dioxygenase type I superfamily protein.
  
     0.541
EFL23369.1
SugE protein.
      
 0.508
EFL24350.1
Sporulation protein; Truncated CDS; 55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and ORF1422).
  
     0.507
EFL26077.1
Putative membrane protein.
  
     0.498
EFL21446.1
Putative regulatory protein.
  
     0.472
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.