STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22866.1Putative secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (234 aa)    
Predicted Functional Partners:
EFL22870.1
Putative multiple sugar transport system substrate-binding protein; Truncated CDS.
 
     0.834
EFL22109.1
LigA protein.
  
  0.801
EFL22869.1
Putative transmembrane lipoprotein LplB.
       0.797
EFL22868.1
ABC transporter, permease.
       0.796
EFL23090.1
Putative secreted lyase.
  
  0.765
EFL23091.1
Putative secreted lyase.
  
  0.753
EFL28409.1
Putative pectinesterase/pectate lyase protein.
  
  
 0.743
EFL20729.1
Conserved hypothetical protein.
  
  
 0.722
EFL21448.1
alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1,2-fucosidase 2).
 
 
  0.717
EFL21994.1
Cellulase.
  
     0.670
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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