STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22867.1Putative beta-galactosidase. (663 aa)    
Predicted Functional Partners:
EFL22044.1
Alpha-galactosidase.
 
  
 0.898
EFL20982.1
Putative beta-galactosidase.
  
  
 
0.839
EFL26301.1
Alpha-galactosidase.
 
  
 0.829
EFL22224.1
Putative neuraminidase.
  
 0.804
EFL26656.1
Putative neuramidase; Truncated CDS; unextendable partial coding region.
  
 0.804
EFL27283.1
Beta-galactosidase.
 
  
  0.750
EFL22868.1
ABC transporter, permease.
 
    0.729
EFL24446.1
Putative aldose-1-epimerase.
  
 
 0.729
EFL26429.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.729
EFL22869.1
Putative transmembrane lipoprotein LplB.
 
  
 0.717
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.