STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22869.1Putative transmembrane lipoprotein LplB. (350 aa)    
Predicted Functional Partners:
EFL22868.1
ABC transporter, permease.
 
 
 0.995
EFL22870.1
Putative multiple sugar transport system substrate-binding protein; Truncated CDS.
 
 
 0.995
EFL21851.1
ABC transporter, permease.
 
 
 0.817
EFL25973.1
Putative ABC-type sugar transport system, permease component.
 
 
 0.812
EFL22866.1
Putative secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
       0.775
EFL22621.1
Putative ABC-type sugar transport system, permease component.
 
 
 0.751
EFL26620.1
Putative binding-protein dependent transport protein.
 
 
 0.747
EFL28628.1
Sugar transport permease BglB.
 
 
 0.742
EFL28356.1
ABC transporter, permease.
 
 
 0.737
EFL27073.1
Sugar ABC transporter, permease.
 
 
 0.733
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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