STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22873.1Helix-turn-helix, Fis-type. (574 aa)    
Predicted Functional Partners:
EFL22874.1
Putative ATP/GTP-binding protein.
 
     0.810
EFL22872.1
Aldehyde dehydrogenase.
       0.779
EFL27213.1
Putative regulatory protein.
  
     0.736
EFL28875.1
Regulatory protein.
  
     0.684
EFL21364.1
Putative integral membrane protein.
  
     0.565
EFL22863.1
Putative acyl-CoA dehydrogenase.
       0.564
EFL22875.1
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.553
EFL22989.1
Putative transcriptional regulator; Truncated CDS; unextendable partial coding region.
  
     0.506
EFL24774.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.481
EFL24088.1
Conserved hypothetical protein.
  
     0.477
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.