Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22874.1Putative ATP/GTP-binding protein. (725 aa)    
Predicted Functional Partners:
EFL26086.1
Conserved hypothetical protein.
 
 
   0.854
EFL22873.1
Helix-turn-helix, Fis-type.
 
     0.789
EFL24645.1
Conserved hypothetical protein.
  
     0.774
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.773
EFL24637.1
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.773
EFL26080.1
Conserved hypothetical protein.
  
     0.773
EFL26159.1
Putative membrane protein.
  
     0.773
EFL23359.1
Putative tetratricopeptide repeat protein.
  
     0.772
EFL23748.1
Putative membrane protein.
  
     0.771
EFL24343.1
Putative membrane protein.
  
     0.771
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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