STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22887.1AsnC family transcriptional regulator. (160 aa)    
Predicted Functional Partners:
EFL22888.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.966
EFL22886.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.846
EFL22877.1
Putative oxidoreductase.
 
   
 0.764
EFL22881.1
Putative ABC-transporter polyamine-binding lipoprotein.
 
     0.731
EFL22892.1
Putative ABC transporter, ATP binding protein.
     
 0.673
EFL21567.1
glycine/D-amino acid oxidase; Truncated CDS; unextendable partial coding region.
 
     0.662
EFL21916.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.640
EFL28594.1
glycine/D-amino acid oxidase.
 
     0.638
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.632
EFL27832.1
Putative oxidoreductase protein; Truncated CDS.
 
     0.616
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.