Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL22909.1Conserved hypothetical protein; Belongs to the UPF0102 family. (119 aa)    
Predicted Functional Partners:
EFL22908.1
Mg chelatase-like protein.
 
  
 0.963
EFL22907.1
SMF protein.
 
  
 0.901
EFL22910.1
Putative CTP synthase (UTP-ammonia lyase).
       0.767
EFL22912.1
Putative signal peptidase I; Belongs to the peptidase S26 family.
  
    0.745
EFL22913.1
Signal peptidase I; Belongs to the peptidase S26 family.
 
    0.743
EFL22911.1
Putative MutT/nudix-family hydrolase; Belongs to the Nudix hydrolase family.
       0.736
EFL22906.1
RNA polymerase sigma factor WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.727
EFL22914.1
Signal peptidase I; Overlaps another CDS with the same product name; Belongs to the peptidase S26 family.
 
    0.699
EFL22915.1
Signal peptidase I; Overlaps another CDS with the same product name; Belongs to the peptidase S26 family.
 
    0.696
EFL22905.1
Putative transcriptional regulator.
       0.686
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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