STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22940.1Acylphosphatase. (93 aa)    
Predicted Functional Partners:
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.921
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.908
EFL28187.1
Peptide amidase.
    
  0.892
EFL25473.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.890
EFL28257.1
Piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.890
EFL22872.1
Aldehyde dehydrogenase.
     
 0.873
EFL23955.1
6-carboxyhexanoate-CoA ligase.
  
  
  0.816
EFL23597.1
glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
    
  0.800
EFL25361.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
    
  0.800
EFL28132.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
    
  0.800
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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