STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22941.1Putative membrane protein. (299 aa)    
Predicted Functional Partners:
EFL22942.1
Putative transcriptional regulator.
       0.807
EFL22940.1
Acylphosphatase.
       0.799
EFL26952.1
Putative branched chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
   
   0.716
EFL22939.1
Conserved hypothetical protein.
       0.704
EFL22936.1
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.656
EFL29402.1
Collagen triple helix repeat domain protein.
  
    0.552
EFL20389.1
D-isomer specific 2-hydroxyacid dehydrogenase.
 
  
 0.513
EFL22823.1
M16 family peptidase; Belongs to the peptidase M16 family.
 
     0.493
EFL28512.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.485
EFL22777.1
Conserved hypothetical protein.
   
    0.463
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.