Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL22961.1 | EFL22962.1 | SSOG_02675 | SSOG_02676 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Conserved hypothetical protein. | 0.791 |
| EFL22961.1 | EFL22964.1 | SSOG_02675 | SSOG_02678 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | 0.727 |
| EFL22961.1 | EFL22965.1 | SSOG_02675 | SSOG_02679 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | IclR family transcriptional regulator. | 0.694 |
| EFL22961.1 | EFL23776.1 | SSOG_02675 | SSOG_03490 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Putative secreted protein. | 0.594 |
| EFL22961.1 | EFL24676.1 | SSOG_02675 | SSOG_04390 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DnaA protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.681 |
| EFL22961.1 | leuD | SSOG_02675 | SSOG_02677 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.727 |
| EFL22961.1 | rplS | SSOG_02675 | SSOG_02630 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.654 |
| EFL22961.1 | rpsO | SSOG_02675 | SSOG_02539 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.728 |
| EFL22961.1 | rpsT | SSOG_02675 | SSOG_05886 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.737 |
| EFL22961.1 | topA | SSOG_02675 | SSOG_04703 | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.593 |
| EFL22962.1 | EFL22961.1 | SSOG_02676 | SSOG_02675 | Conserved hypothetical protein. | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.791 |
| EFL22962.1 | EFL22964.1 | SSOG_02676 | SSOG_02678 | Conserved hypothetical protein. | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | 0.791 |
| EFL22962.1 | EFL22965.1 | SSOG_02676 | SSOG_02679 | Conserved hypothetical protein. | IclR family transcriptional regulator. | 0.733 |
| EFL22962.1 | leuD | SSOG_02676 | SSOG_02677 | Conserved hypothetical protein. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.791 |
| EFL22964.1 | EFL22961.1 | SSOG_02678 | SSOG_02675 | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.727 |
| EFL22964.1 | EFL22962.1 | SSOG_02678 | SSOG_02676 | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | Conserved hypothetical protein. | 0.791 |
| EFL22964.1 | EFL22965.1 | SSOG_02678 | SSOG_02679 | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | IclR family transcriptional regulator. | 0.849 |
| EFL22964.1 | leuD | SSOG_02678 | SSOG_02677 | 3-isopropylmalate dehydratase, large subunit; Truncated CDS. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.999 |
| EFL22965.1 | EFL22961.1 | SSOG_02679 | SSOG_02675 | IclR family transcriptional regulator. | Putative DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.694 |
| EFL22965.1 | EFL22962.1 | SSOG_02679 | SSOG_02676 | IclR family transcriptional regulator. | Conserved hypothetical protein. | 0.733 |
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