STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22980.1methylmalonyl-CoA decarboxylase, alpha subunit. (527 aa)    
Predicted Functional Partners:
EFL22979.1
Conserved hypothetical protein.
    
 0.989
EFL25926.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.985
EFL23166.1
methylmalonyl-CoA epimerase.
 
 
 0.981
EFL25927.1
acetyl/propionyl-CoA carboxylase, alpha subunit; Unextendable partial coding region.
 
 0.970
EFL25485.1
acetyl-CoA carboxylase subunit alpha.
 
 0.967
EFL25833.1
acetyl-CoA carboxylase subunit alpha.
 
 0.967
EFL25233.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.966
EFL25491.1
biotin-[acetyl-CoA-carboxylase] ligase.
 
 
 0.940
EFL22081.1
Fatty oxidation complex, alpha subunit.
  
 
 0.894
EFL28512.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.886
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.