STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22981.1Putative polysaccharide lyase family 8. (795 aa)    
Predicted Functional Partners:
EFL22980.1
methylmalonyl-CoA decarboxylase, alpha subunit.
       0.765
EFL22979.1
Conserved hypothetical protein.
       0.751
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
    
 0.679
EFL21385.1
Mannose-1-phosphate guanyltransferase.
     
 0.654
EFL23866.1
Conserved hypothetical protein.
  
     0.630
EFL22982.1
YceI like family protein; Belongs to the UPF0312 family.
       0.597
EFL26100.1
4-alpha-glucanotransferase.
    
 0.588
EFL22584.1
Conserved hypothetical protein.
  
     0.581
EFL20691.1
Conserved hypothetical protein; Truncated CDS.
  
     0.534
EFL24787.1
Putative hydrolase, NUDIX family.
  
    0.512
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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