STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22988.1Proline dehydrogenase. (308 aa)    
Predicted Functional Partners:
EFL22987.1
1-pyrroline-5-carboxylate dehydrogenase.
 0.924
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.912
EFL25280.1
LigA protein.
   
 0.912
EFL26930.1
Glutamate synthase large subunit.
   
 
 0.895
EFL28522.1
Proline racemase; Belongs to the proline racemase family.
    
 0.863
EFL20461.1
Prolyl aminopeptidase; Belongs to the peptidase S33 family.
     
 0.857
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
   
 
 0.807
EFL28523.1
Ornithine cyclodeaminase/mu-crystallin; Truncated CDS.
  
 
 0.776
EFL22989.1
Putative transcriptional regulator; Truncated CDS; unextendable partial coding region.
       0.774
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
    
 0.750
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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