STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23001.1Pas:ggdef. (1019 aa)    
Predicted Functional Partners:
EFL20670.1
Sensor histidine kinase/response regulator.
 
 0.999
EFL21745.1
Sensory box/GGDEF family protein.
 
0.999
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.999
EFL25860.1
Developmental regulator MorA.
 
0.999
EFL27138.1
Sensor histidine kinase/response regulator.
  
 0.999
EFL28762.1
Glycosyl transferase, family 2.
  
 0.999
EFL28751.1
Putative integral membrane sensor protein.
 
 0.996
EFL20519.1
Putative membrane protein.
  
 0.995
EFL20622.1
Putative integral membrane sensor protein.
  
 0.995
EFL21328.1
Putative PAS fold protein.
  
 0.995
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.