STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23005.1Conserved hypothetical protein. (55 aa)    
Predicted Functional Partners:
EFL23003.1
Putative oxidoreductase.
       0.744
EFL23002.1
Putative dehydrogenase.
       0.707
EFL25504.1
Conserved hypothetical protein.
    
 
 0.635
EFL23004.1
Putative glucose dehydrogenase.
       0.633
EFL25793.1
Putative acetyltransferase.
       0.605
EFL28573.1
PE-PGRS family protein.
       0.605
EFL23001.1
Pas:ggdef.
  
  
 0.515
EFL21081.1
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein.
   
  
 0.481
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 
 0.426
EFL23438.1
Probable serine protease (serine proteinase).
    
   0.410
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.