STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23007.1Phospholipase C, phosphocholine-specific. (705 aa)    
Predicted Functional Partners:
EFL25858.1
Phosphoesterase.
  
  
 
0.848
EFL25580.1
Phospholipase C.
  
  
 
0.812
EFL20586.1
Inositol monophosphatase.
   
 
  0.787
EFL22885.1
Putative glycerophosphoryl diester phosphodiesterase.
   
 
  0.620
EFL23006.1
Drug exporters of the RND family protein.
       0.584
EFL23008.1
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.486
EFL23009.1
Oligopeptide ABC transporter, permease AppC.
       0.486
EFL23010.1
Peptide ABC transporter, permease.
       0.486
EFL23011.1
Putative peptide-binding transport protein.
       0.486
EFL20409.1
Rieske (2Fe-2S) region; Truncated CDS.
  
  
  0.485
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.