STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23009.1Oligopeptide ABC transporter, permease AppC. (300 aa)    
Predicted Functional Partners:
EFL23010.1
Peptide ABC transporter, permease.
 
 0.971
EFL23011.1
Putative peptide-binding transport protein.
 
  0.966
EFL23008.1
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.963
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.902
EFL27423.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
  0.900
EFL22420.1
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.899
EFL21029.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Unextendable partial coding region.
 
  0.892
EFL23477.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.888
EFL23466.1
Oligopeptide ABC transporter, permease.
 
 
 0.886
EFL23046.1
Dipeptide transporter 1 (ABC superfamily, membrane).
 
 0.885
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.