Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23022.1Conserved hypothetical protein. (203 aa)    
Predicted Functional Partners:
EFL23677.1
Conserved hypothetical protein.
  
     0.629
EFL23021.1
Putative TetR-family transcriptional regulator.
 
     0.624
EFL26296.1
Putative fibronectin type III domain protein.
  
     0.602
EFL21958.1
Conserved hypothetical protein.
  
     0.585
EFL20868.1
Conserved hypothetical protein.
  
     0.564
EFL22585.1
Putative conjugal transfer protein.
  
     0.540
EFL24278.1
Conserved hypothetical protein.
  
     0.538
EFL26974.1
Conserved hypothetical protein.
  
     0.528
EFL23866.1
Conserved hypothetical protein.
  
     0.526
EFL27959.1
Conserved hypothetical protein.
  
     0.520
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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