STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23024.1Putative abortive infection protein. (445 aa)    
Predicted Functional Partners:
EFL23023.1
Hypothetical protein.
 
     0.948
EFL24480.1
DNA modification methyltransferase-related protein.
 
  
 0.876
EFL20340.1
Putative integral membrane protein.
  
  
 0.859
EFL21960.1
Conserved hypothetical protein.
  
    0.802
EFL25874.1
Conserved hypothetical protein.
  
    0.802
EFL26352.1
Putative regulatory protein.
  
  
 0.690
EFL26357.1
Conserved hypothetical protein.
  
  
 0.690
EFL27514.1
Transposase.
  
  
 0.690
EFL27515.1
Transposase.
  
  
 0.690
EFL27633.1
IS4 family transposase; Unextendable partial coding region.
  
  
 0.690
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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